Authentication of the family Polygonaceae in Chinese pharmacopoeia by DNA barcoding technique.

Song J, Yao H, Li Y, Li X, Lin Y, Liu C, Han J, Xie C, Chen S.

Abstract

ETHNOPHARMACOLOGICAL RELEVANCE: Medicinal plants belonging to the family Polygonaceae in Chinese pharmacopoeiapossess important medicinal efficacy in traditional Chinese medicines.

AIM OF THE STUDY: DNA barcodes are first used to discriminate the Polygonaceae in Chinese pharmacopoeia and their adulterants.

MATERIALS AND METHODS: DNA samples, extracted from thirty-eight specimens belonging to eighteen species in Polygonaceae, were used as templates. Eight candidate barcodes were amplified by polymerase chain reaction. Sequence analysis was accomplished by CodonCode Aligner V 2.06 and DNAman V 6. Species identification was performed using MEGA V 4.0.

RESULTS: The amplification efficiency of six candidate DNA barcodes (rbcL, trnH-psbA, ndhJ, rpoB, rpoC1, accD) was 100%, while the efficiency of YCF5 and nrITS was 56% and 44%, respectively. The interspecific divergence was highest for the trnH-psbA (20.05%), followed by the nrITS (14.01%) across all species pairs, while intraspecific variation both within populations and between populations was absent (0.0%). The trnH-psbA can not only distinguish ten species of Polygonaceae in Chinese pharmacopoeia, but also recognize eight other species of Polygonaceae including their adulterants.

CONCLUSION: Our findings show that DNA barcoding is an efficient tool for identification of Polygonaceae in Chinese pharmacopoeia and their adulterants.

J Ethnopharmacol. 2009 Jul 30;124(3):434-9. doi: 10.1016/j.jep.2009.05.042. Epub 2009 Jun 6.